Project Description: Need an experienced computational biologist to develop and implement algorithms for pangenome graph analysis. Work involves supporting the Human Pangenome Project and Vertebrate Genomes Project.
Key Tasks:
Develop sequence alignment and graph building methods for pangenome analysis
Implement algorithms to process and analyze large-scale genomic datasets
Create reproducible computational workflows and pipelines
Document code and methods using Git/GitHub
Optimize existing tools for scalability and performance
Required Skills:
Strong programming skills (Python, C++, or similar)
Linux/command line proficiency
Experience with bioinformatics tools and genomic data
Git version control
Ability to work independently on complex computational problems
Nice to Have:
Machine learning experience
Graph algorithms knowledge
Previous pangenomics work
Published computational biology research
Duration: Long-term contract with potential for ongoing work
Work Type: Remote, flexible hours, regular check-ins via video conference
Deliverables: Working code, documented workflows, technical reports on methods developed
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