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Genome Assembly / NGS data Analysis

$30/hr Starting at $100

Hello everybody! A Bioinformatician has 10 years of extensive working experience in Next Generation Sequencing (NGS) data analysis. Published more than 20 research articles in high impact journals (Nature, Nature Scientific Reports, Frontiers in Plant Science. PlosOne etc.) # NGS RNA-seq data analysis: # Experienced in Affymetrix SNP genotyping chip development : *Affymetrix Chip developed: Pigenopea and Mango # Experience in Genome-wide Identification of SNPs, Indels and SSR with flanking primer (For several Plant and Bacterial genome) ## Genome-wide identification : 1) Repetitive element and masking; 2) Gene perdition and Annotation; 3)Transcription Factor and Resistance gene identification # Development of customized genome browser (developed for Mango Genome) # Bash pipeline development. (developed several in-house pipelines for automated genome assembly, Differential gene expression. etc.) #Teaching: Genome assembly, Introduction to Linux, Genome-wide identification of SNP and SSR (concept to practical sessions) I love to interact with biologists for listening and understanding their problem of regular basis so that I can offer and suggest the best solution for those biological problems. Thanks

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$30/hr Ongoing

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Hello everybody! A Bioinformatician has 10 years of extensive working experience in Next Generation Sequencing (NGS) data analysis. Published more than 20 research articles in high impact journals (Nature, Nature Scientific Reports, Frontiers in Plant Science. PlosOne etc.) # NGS RNA-seq data analysis: # Experienced in Affymetrix SNP genotyping chip development : *Affymetrix Chip developed: Pigenopea and Mango # Experience in Genome-wide Identification of SNPs, Indels and SSR with flanking primer (For several Plant and Bacterial genome) ## Genome-wide identification : 1) Repetitive element and masking; 2) Gene perdition and Annotation; 3)Transcription Factor and Resistance gene identification # Development of customized genome browser (developed for Mango Genome) # Bash pipeline development. (developed several in-house pipelines for automated genome assembly, Differential gene expression. etc.) #Teaching: Genome assembly, Introduction to Linux, Genome-wide identification of SNP and SSR (concept to practical sessions) I love to interact with biologists for listening and understanding their problem of regular basis so that I can offer and suggest the best solution for those biological problems. Thanks

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BashBioinformaticsData ManagementResearch

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